Plot the fitted empirical spline of detected proportions to average observed intensities

Usage

plotEmpSplines(
  nuis,
  X,
  params,
  capped = FALSE,
  add.jitter = TRUE,
  jitter.amount = NULL,
  point.cex = 0.2,
  newPlot = TRUE,
  logit = FALSE,
  lty = "solid",
  lineCol = "darkgreen",
  lwd = 2,
  xlim = NULL,
  ylim = c(0, 1)
)

Arguments

nuis: The list of nuisance parameters.
X: The basis matrix for the natural cubic spline.
params: Fitted coefficients.
capped: Logical. Whether the probabilities are capped by alpha.
add.jitter: Logical. Whether to add jitter to the detected proportion axis.
jitter.amount: Amount of jittering.
point.cex: Size of the points.
newPlot: Logical. Whether to start a new plot device.
logit: Logical. Whether to plot at the logit scale.
lty: Line type.
lineCol: Line color.
lwd: Line width.
xlim: Limits of the x-axis.
ylim: Limits of the y-axis.

Examples

# See the vignettes.